Function reference • megadepth

All functions
`bam_to_bigwig()`	Convert a BAM file to a BigWig
`bam_to_junctions()`	Extract junctions from a BAM file
`get_coverage()`	Compute coverage summarizations across a set of regions
`install_megadepth()`	Install Megadepth
`megadepth_cmd()` `megadepth_shell()`	Run Megadepth commands
`process_junction_table()`	Process junctions into a STAR compatible format
`read_coverage()` `read_coverage_table()`	Read a coverage TSV file created by Megadepth
`read_junction_table()`	Read a junction TSV file created by Megadepth as a table

Reference